NFIRegulomeDB

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NFIRegulomeDB Gene Search

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Option1

> Find Genes regulated by ALL selected transcription factors

Using this page you can see only TF family names.
If you want to find specific protein name (like NFI-C instead of NFI), use Advanced Search

Option2

> Find Gene information using Gene name

Option3

> Find Transcription factors information

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Simple Sequence Viewer

- select gene to see promoter sequence for the gene

Gene		# of nts per line :
Squence	from to		from ATG

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AP-1(Activatory Protein 1)
AP-2(Activatory Protein 2)
AP-4(Activating Protein 4)
ARE(Antioxidant response element)
ATF(cAMP-dependent transciption factor)
bHLH/E(basic helix-loop-helix E-protein family)
CDX(caudal-related homeobox transcription factor gene family)
CEBP(CCAAT/enhancer binding protein)
coagulation factor(F)(coagulation factor)
CRE site(cAMP response element)
CREB(cAMP responsive element binding protein)
DPE site(Downstream core Promoter Element)
E-box(E-protein binding sequence)
EGR(Early Growth Response Protein family)
ENKTF(Enkephalin Transcription Factor)
ETS(ets variant gene 5)
FOX(Forkhead box)
GAS(Interferon-gamma(IFNgamma) activated site)
GATA(GATA binding protein)
GC rich box(GC rich box)
GKLF(Gut-enriched Krupple-like factor )
GR(Glucocorticoid Receptor)
HIF(hypoxia-inducible factor)
HNF(hepatocyte nuclear factor)
HOX(Homeobox protein)
HRE site(Hypoxia response elements)
HSF(Heat Shock Transcription Factor)
INR(initiator)
KLF(Kruppel-like factors)
LEF1(lymphoid enhancer-binding factor 1)
MAF(Mammary cell Activation Factor)
MRE site(metal response element)
MTF(MRE binding transcription factor)
NFkB(nuclear factor kappa-B)
NFY(nuclear transcription factor Y)
NKX(NK transcription factor )
OCT(Octamer-binding transcription factor)
PDX1(pancreatic and duodenal homeobox 1)
POU(POU domain family)
RARE(Retinoic Acid Response Elements)
RFX1(regulatory factor X)
RUNX(runt related transcription factor )
SF1(steroidogenic factor-1)
SIX(sine oculis homeobox homolog)
SP(sequence-specific transcription factor)
SREBP(sterol regulatory element binding protein )
STAT(signal transducer and activator of transcription )
TATA(TATA box)
TSS(Transcription Start Site)
Unknown(Unknown Transcription factor)
USF(upstream stimulatory factor)
Ybx1(Y box protein 1)
YY1(YY1 transcription factor)

ADA(Homo sapiens)
Adam8(Mus musculus)
Afp(Rattus norvegicus)
AKR1B10(Homo sapiens)
Akr1b7(Mus musculus)
Ar(Rattus norvegicus)
CCL2(Homo sapiens)
CDKN1A(Homo sapiens)
Clu(Mus musculus)
COL1A1(Homo sapiens)
CSH1(Homo sapiens)
CTLA4(Homo sapiens)
CYP17A1(Homo sapiens)
Cyp2a5(Mus musculus)
CYP2B10(Mus musculus)
Fabp4(Mus musculus)
FABP7(Homo sapiens)
Gabra6(Mus musculus)
gadd153(Rattus norvegicus)
GFAP(Homo sapiens)
Gfap(Rattus norvegicus)
GH1(Homo sapiens)
HMGCR(Homo sapiens)
HTR3A(Homo sapiens)
IGFBP5(Homo sapiens)
ITGA5(Homo sapiens)
ITGA6(Homo sapiens)
Klf5(Rattus norvegicus)
LALBA(Homo sapiens)
Lalba(Rattus norvegicus)
Ldhc(Mus musculus)
Lox(Rattus norvegicus)
Lox(Mus musculus)
LOX(Homo sapiens)
Mbp(Mus musculus)
Mt1(Mus musculus)
Nefl(Mus musculus)
Pck1(Rattus norvegicus)
PCK2(Homo sapiens)
PENK(Homo sapiens)
PGK1(Homo sapiens)
PIGR(Homo sapiens)
Pitx2(Rattus norvegicus)
Pitx2(Mus musculus)
PITX2(Homo sapiens)
PLAT(Homo sapiens)
Plp(Rattus norvegicus)
POU1F1(Homo sapiens)
Ren1(Mus musculus)
Rpe65(Mus musculus)
RPE65(Homo sapiens)
Runx2(Mus musculus)
S100B(Homo sapiens)
SCGB2A1(Homo sapiens)
SERPINA3(Homo sapiens)
SERPINE1(Homo sapiens)
Sftpc(Mus musculus)
SLC19A2(Homo sapiens)
SLC25A5(Homo sapiens)
SMUG1(Homo sapiens)
Tcfap2a(Mus musculus)
TFAP2A(Homo sapiens)
TP53(Homo sapiens)
Trp53(Mus musculus)
Wap(Mus musculus)
Wap(Rattus norvegicus)

AP-1(Activator Protein 1)
AP-2(Activator Protein 2)
AP-4(Activator Protein 4)
ARE(Antioxidant response element)
ATF(cAMP-dependent transciption factor)
ATF-2(cAMP-dependent transciption factor 2)
CAR/RXR(constitutive androstane receptor/retinoid X receptor)
CDX1(Caudal type homeobox 1)
CEBP(CCAAT/enhancer binding protein)
CEBPA(CCAAT/enhancer binding protein (C/EBP), alpha)
CEBPB(CCAAT/enhancer binding protein (C/EBP), beta)
CEBPD(CCAAT/enhancer binding protein (C/EBP), delta)
CEBPG(CCAAT/enhancer binding protein (C/EBP), gamma)
CREB1(cAMP responsive element binding protein 1)
CREBBP(CREB binding protein)
DPE(Downstream core Promoter Element)
E-box(E-box)
EGR1(early growth response protein 1)
ENKTF-1(Enkephalin Transcription Factor -1)
Etv5(ets variant gene 5)
F11(coagulation factor XI)
FOXJ2(forkhead box J2)
GAS(Interferon-gamma(IFNgamma) activated site)
GATA-6(GATA binding protein 6)
GATA2(GATA binding protein 2)
GATA4(GATA binding protein 4)
GHF-1(Growth Hormone Factor 1)
GKLF(Gut-enriched Krupple-like factor)
GR(Glucocorticoid Receptor)
GRE(Glucocorticoid Response Element)
HIF-1(hypoxia inducible factor1)
HNF1A(hepatocyte nuclear factor 1 homeobox A)
HNF3(Hepatocyte nuclear factor 3)
HNF4(hepatocyte nuclear factor 4 )
HOX(HOX Transcription Factor)
HRE(Hypoxia response elements)
HSF1(Heat shock transcription factor 1 )
INR(Initiatior)
IPF1(Insulin promoter factor 1)
KLF9(Kruppel-like factor 9)
LEF1(lymphoid enhancer-binding factor 1)
lnr(Initiator Element Transcription Factor)
MAF(Mammary cell Activating Factor)
MRE(metal response element)
MTF1(metal-regulatory transcription factor 1)
NF-Y(Nuclear Factor Y)
NFKB1(nuclear factor kappa beta 1)
NKX2-1(NK2 homeobox 1)
NKX2-8(NK2 homeobox 8)
NKX6-2(NK6 homeobox 2)
Oct-1(Oct-1 transcription factor)
POU(POU Transcription Factor)
POU2F1(POU class 2 homeobox 1)
RARE(Retinoic Acid Response Elements)
RFX1(regulatory factor X)
RUNX2(runt related transcription factor 2)
SF1(steroidogenic factor-1)
SIX3(SIX homeobox 3)
SIX4(SIX homeobox 4)
SIX5(SIX Homeobox 5)
Sp1(Sp1 transcription factor)
Sp3(trans-acting transcription factor 3)
SREBP(sterol regulatory element binding protein )
STAT1(Signal Transducer and Activator of Transcription 1)
STAT5(Signal transducer and activator of transcription 5)
TATA(TATA box)
TCF12(transcription factor 12 )
TSS(Transcription Start Point)
USF1(upstream transcription factor 1)
YBox(Y Box Transcription Factor)
YY1(YY1 transcription factor)